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Artifact Info
| Name: | mydas Distributed Annotation Server |
| Description: | This project aims to offer an easy-to-extend Java DAS server framework.
It offers several advantages:
* Implementing data sources is very easy but also flexible and powerful.
* Data caching is built into the system, with access to the caching
mechanism made available to the data sources.
* All aspects of the server are highly configurable, including
selecting options where the DAS 1.53 specification offers
choices to the implementor.
* The latest Java technologies have been used throughout the
system to optimise performance and simplify data source development.
* Wherever possible the same terminology is used in the API as in
the DAS specification and XML - again, making data source
development more easy.
* The server allows XSLT transforms of the DAS XML to be configured
to provide a simple DAS client view (limited to the single DAS
source).
More details of the DAS protocol, DAS servers and DAS clients can
be found at http://www.biodas.org/wiki/Main_Page.
The first version of this server is a complete implementation of
Distributed Sequence Annotation System (DAS) Version 1.53.
If you are interested in learning more about DAS 1.53, the
specification is highly recommended as a concise and complete
description of the DAS protocol that can be obtained from:
http://biodas.org/documents/spec.html |
| GroupId: | uk.ac.ebi.mydas |
| ArtifactId: | mydas |
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| Included classes
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uk/ac/ebi/mydas/controller/CacheManager
uk/ac/ebi/mydas/controller/ConfigXmlUnmarshaller
uk/ac/ebi/mydas/controller/DasFeatureRequestFilter
uk/ac/ebi/mydas/controller/DataSourceConfiguration
uk/ac/ebi/mydas/controller/DataSourceManager
uk/ac/ebi/mydas/controller/EmptyCache
uk/ac/ebi/mydas/controller/FoundFeaturesReporter
uk/ac/ebi/mydas/controller/GlobalConfiguration
uk/ac/ebi/mydas/controller/MydasServlet
uk/ac/ebi/mydas/controller/SegmentQuery
uk/ac/ebi/mydas/controller/SegmentReporter
uk/ac/ebi/mydas/controller/SequenceReporter
uk/ac/ebi/mydas/controller/ServerConfiguration
uk/ac/ebi/mydas/controller/UnknownSegmentReporter
uk/ac/ebi/mydas/controller/XDasStatus
uk/ac/ebi/mydas/datasource/AnnotationDataSource
uk/ac/ebi/mydas/datasource/RangeHandlingAnnotationDataSource
uk/ac/ebi/mydas/datasource/RangeHandlingReferenceDataSource
uk/ac/ebi/mydas/datasource/ReferenceDataSource
uk/ac/ebi/mydas/exceptions/BadCommandArgumentsException
uk/ac/ebi/mydas/exceptions/BadCommandException
uk/ac/ebi/mydas/exceptions/BadDataSourceException
uk/ac/ebi/mydas/exceptions/BadReferenceObjectException
uk/ac/ebi/mydas/exceptions/BadStylesheetException
uk/ac/ebi/mydas/exceptions/ConfigurationException
uk/ac/ebi/mydas/exceptions/CoordinateErrorException
uk/ac/ebi/mydas/exceptions/DataSourceException
uk/ac/ebi/mydas/exceptions/UnimplementedFeatureException
uk/ac/ebi/mydas/model/DasAnnotatedSegment
uk/ac/ebi/mydas/model/DasComponentFeature
uk/ac/ebi/mydas/model/DasEntryPoint
uk/ac/ebi/mydas/model/DasEntryPointOrientation
uk/ac/ebi/mydas/model/DasFeature
uk/ac/ebi/mydas/model/DasFeatureOrientation
uk/ac/ebi/mydas/model/DasGroup
uk/ac/ebi/mydas/model/DasPhase
uk/ac/ebi/mydas/model/DasRestrictedAnnotatedSegment
uk/ac/ebi/mydas/model/DasRestrictedSequence
uk/ac/ebi/mydas/model/DasSegment
uk/ac/ebi/mydas/model/DasSequence
uk/ac/ebi/mydas/model/DasTarget
uk/ac/ebi/mydas/model/DasType
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